• NEWSLETTER
    • Schedule a Call
    The Charity CFO
    • Services
      • Bookkeeping
      • Accounting
      • Grant Management
      • Budgeting & Forecasting
      • Audit Assistance
      • System Migration & Tech Integration
      • Tax Preparation
    • Who We Serve
      • Human & Social Services
      • Education & Workforce Development
      • Youth & Community Development
      • Health & Human Services
      • Legal, Advocacy & Civil Rights
      • Religious & Faith-Based
      • Arts, Cultural & Environmental
      • Fundraising & Philanthropy
      • Animal Rights and Welfare
    • About
      • Our Team
      • Our Process
    • Resources
      • Blog
      • Podcast
      • Testimonials
      • Newsletter
    • Careers
    • Menu Menu

    Nonprofit Tax Filing: 7 Steps to Peace of Mind

    Most people dread filing taxes. The piles of paperwork, long hours, and complicated tax codes can be truly overwhelming. Nonprofit leaders have an especially hard time understanding, preparing and filing their returns. They’re ever busy trying to make a positive difference in their communities, which is why tax filing often comes as an afterthought.

    You see, a 501 nonprofit corporation is recognized as tax-exempt by the IRS but this doesn’t mean they are exempt from filing taxes. Most still need to file a tax return to maintain their nonprofit status and keep their organization tax compliant.

    Fortunately, filing taxes for a nonprofit doesn’t need to be stressful. By following these 7 steps to nonprofit tax filing, you can sail through the process and get your taxes done quickly and easily.

    Start With the Fundamentals of Nonprofit Tax Filing

    Non-profit organizations operate in many areas of society, including education, healthcare, sports, and social services. While dozens of nonprofit exempt statuses exist, they generally fall under 5 types of nonprofits, including;

    • Religious and church
    • Charitable
    • Private foundations
    • Political organizations
    • Miscellaneous nonprofits such as charitable risk pools,  Federal Credit Unions, hospital service organizations, and retirement funds

    These nonprofit categories fall under the following tax-exempt status:

    • 501(c)(3): Charitable, Religious, or Educational Organizations
    • 501(c)(4): Community social welfare organizations
    • 501(c)(6): Business leagues, professional associations, real estate boards, and board-of-trade organizations.

    Each has its own set of tax laws, regulations, and forms to fill out. As you prepare to file taxes, make sure your organization falls into the correct classification.

    But why is this really important?

    • To ensure that you don’t lose your tax-exempt status, which allows your organization to have an exemption from paying taxes.
    • To avoid late filing penalties that can quickly add up depending on the amount the organization has received during the calendar year.
    • To stay compliant with various state and federal regulations.
    • To maintain good governance practices and requirements
    • To demonstrate financial transparency to your donors, members, and the public

    To make sure that your organization complies with the taxman, you should file IRS Form 990 by May 15 each year. This form allows the IRS and the general public to track a nonprofit’s finances, management practices, and governance structure.

    The type of Form 990 to be filed depends on the gross receipts of the organization within that filing year. These forms include:

    • Form 990 or 990-EZ: Filed by large organizations with gross receipts of more than $50,000
    • Form 990-N (e-Postcard): Filed by small organizations with gross receipts of $50,000 or less
    • 990-PF: Filed by private foundations

    Take a Year-Round approach

    Many nonprofits make the mistake of waiting till the last minute to prepare and file their taxes. Unfortunately, if you wait until the last minute you are more likely to make mistakes, overlook important information, and experience unnecessary stress and anxiety.

    Instead, develop a year-round strategy for filing taxes that keeps your organization on track throughout the entire tax filing process. This includes:

    • Tracking all income and expenses
    • Making sure your accounting matches your bank statements
    • Keeping up with deadlines
    • Reviewing your past tax returns to identify any mistakes
    • Staying up-to-date on the latest changes in tax regulations
    • Preparing an accurate budget and financial statements

    Tracking expenses

    Tracking expenses help nonprofits to maximize their resources and solve more challenges for the communities they serve. Careful tracking also makes tax filing easier by allowing organizations to quickly find the information they need when filling out their forms.

    Invest in the correct processes, policies, and technologies to ensure all expenses are tracked and recorded accurately, including:

    • Reconciling all bank account and credit card statements
    • Ensuring that receipts are collected for all expenses
    • Run policy checks on specific project expenses
    • Categorizing each expense correctly

    Tracking Revenue

    Another measure to avoid stressful filing is by keeping up with the organization’s revenue streams. NPOs should track all donations, grants, and investments made to their organization to make sure they are properly accounted for.

    Nonprofits should also keep records of when these donations are made and what type of payment was accepted (cash, check, or credit card). This will help when preparing the tax returns, as well as ensure that donations are properly recognized and acknowledged.

    You’ll also need to understand how and when to recognize different revenue streams. Proper revenue recognition is a core accounting principle that ensures proper financial reporting, ensuring that you remain compliant and maintain donor confidence.

    Monthly Financial Reporting

    Maintaining accurate and timely financial reporting is one of the most effective ways to keep your organization in compliance and ready for tax filing.

    Monthly financial statements can have a clear view of your financials and stay on top of your organization’s future expenses. This complete visibility of financial information at all times is necessary to maintain a strong cash inflow and help make informed economic decisions.

    According to GAPP, some of the most recommended financial reports that you should generate monthly include:

    • Statement of activities
    • Statement of cash flows
    • Statements of financial position
    • Statement of functional expenses
    • Donor reports
    • Marketing reports

    Pay Quarterly Estimates

    Most nonprofits do not have to pay federal or state income taxes, but they may still have to pay quarterly estimates if they engage in activities that generate unrelated business income.

    According to the IRS, a nonprofit organization must pay quarterly estimated tax on unrelated business income if it expects its annual tax to be more than $500. This Unrelated Business Income Tax, or “UBIT”, is calculated on the organization’s net income from unrelated activities and is due each quarter.

    Use Form 990W to determine your estimated tax payments. It’s important to ensure that your organization is paying the correct amount of taxes each quarter. Failing to pay estimated taxes on time can result in huge interest and penalties that could jeopardize your nonprofit’s financial health.

    Work with a Trusted Expert for Peace of Mind

    Filing taxes for a nonprofit organization can be challenging, time-consuming, and worst of all, stressful. You don’t want to make any mistakes that could trigger an audit or even the loss of your 501(c)(3) status.

    That’s why it’s important to work with an experienced tax professional who understands the specific needs of nonprofit organizations. A trusted expert can help guide you through the filing process and make sure all of your documents are accurate and complete.

    At TheCharityCFO, we have experienced professionals that help nonprofits just like yours stay on top of their taxes and meet filing deadlines. Our team can provide comprehensive tax and financial guidance to help your organization remain in compliance with all state and federal regulations.

    Contact us today to learn more about our services and how we can help you achieve peace of mind with your nonprofit’s tax filing.

    📬 Join Our Newsletter

    https://go.thecharitycfo.com/l/995872/2025-02-24/6ldn1

    No time to read this article now? Download it for later.

    Popular
    • What is Financial Oversight?
      Nonprofit Accounting Tips, Tools, & Tricks Your Organization...January 22, 2020 - 4:23 pm
    • nonprofit fundraising strategies
      Do Nonprofits Pay Taxes? This is What You Should KnowJanuary 22, 2020 - 4:31 pm
    • The Charity: 6 Common Tax Mistakes that Non-Profits Mak...January 22, 2020 - 4:55 pm
    • We’re Hiring!January 29, 2020 - 9:31 pm

    Categories

    • Accounting
    • Accounting, Budgeting & Leadership Strategy
    • Accounting|Audit|CharityCFO
    • Accounting|Audit|Grants|Nonprofit|Reporting|Taxes
    • Accounting|Audits|Expenses|Fundraising|Grants|Nonprofit|Operations|Reporting
    • Accounting|Board Management|Leadership|Nonprofit|Operations
    • Accounting|CharityCFO
    • Accounting|Expenses|Grants|Nonprofit|Reporting
    • Accounting|Fundraising|Grants
    • Accounting|Leadership|Nonprofit
    • Audit
    • Audits
    • Board Management
    • CFO Responsibilities
    • CFO Services Transition
    • CharityCFO
    • CharityCFO|Nonprofit
    • Compliance and Taxation
    • COVID-19 Response
    • Cryptocurrency
    • Diversified Funding Models
    • Expenses
    • Fractional & Outsourced Executive Services
    • Fundraising
    • Grants
    • Investment
    • Leadership
    • Leadership|Nonprofit|Operations
    • Miscellaneous
    • Nonprofit
    • Nonprofit Financial Leadership
    • Nonprofit Financial Maturity
    • Nonprofit Financial Operations
    • Nonprofit Revenue Strategies
    • Nonprofit Revenue Strategy
    • Nonprofit Strategic Leadership
    • Operations
    • Payroll
    • Reporting
    • Taxes
    • Team Contribution
    • Team News
    • Trending
    • Uncategorized
    Left Aligned Cfo Logo White

    Who We Are

    About Us

    Our Team

    Testimonials

    Careers

    Terms and Conditions

    How We Help

    Bookkeeping

    Accounting

    Grant Management

    Budgeting & Forecasting

    Audit Assistance

    System Migration & Tech Integration

    Tax Preparation

    Get in Touch

    1310 Papin Street, Suite 300

    St. Louis, MO 63103

    (314) 390-0220

    [email protected]

    Website by Abstrakt Marketing Group ©
      • Sitemap
      • Privacy Policy
      Link to: How to Comply with Accounting Standards for Nonprofits Link to: How to Comply with Accounting Standards for Nonprofits How to Comply with Accounting Standards for Nonprofits Link to: Understanding the Nonprofit Statement of Cash Flows Link to: Understanding the Nonprofit Statement of Cash Flows Understanding the Nonprofit Statement of Cash Flows
      Scroll to top Scroll to top Scroll to top

      This site uses cookies. By continuing to browse the site, you are agreeing to our use of cookies.

      AcceptLearn more

      Cookie and Privacy Settings



      How we use cookies

      We may request cookies to be set on your device. We use cookies to let us know when you visit our websites, how you interact with us, to enrich your user experience, and to customize your relationship with our website.

      Click on the different category headings to find out more. You can also change some of your preferences. Note that blocking some types of cookies may impact your experience on our websites and the services we are able to offer.

      Essential Website Cookies

      These cookies are strictly necessary to provide you with services available through our website and to use some of its features.

      Because these cookies are strictly necessary to deliver the website, refusing them will have impact how our site functions. You always can block or delete cookies by changing your browser settings and force blocking all cookies on this website. But this will always prompt you to accept/refuse cookies when revisiting our site.

      We fully respect if you want to refuse cookies but to avoid asking you again and again kindly allow us to store a cookie for that. You are free to opt out any time or opt in for other cookies to get a better experience. If you refuse cookies we will remove all set cookies in our domain.

      We provide you with a list of stored cookies on your computer in our domain so you can check what we stored. Due to security reasons we are not able to show or modify cookies from other domains. You can check these in your browser security settings.

      Other external services

      We also use different external services like Google Webfonts, Google Maps, and external Video providers. Since these providers may collect personal data like your IP address we allow you to block them here. Please be aware that this might heavily reduce the functionality and appearance of our site. Changes will take effect once you reload the page.

      Google Webfont Settings:

      Google Map Settings:

      Google reCaptcha Settings:

      Vimeo and Youtube video embeds:

      Accept settingsHide notification only
      X

      Help Center

      Running a Nonprofit Is Hard. We’re Here to Help.

      Receive expert tips, financial guidance, and real-world advice—straight delivered to your inbox.

      Subscribe
      Discover The Charity CFO Financial Blueprint: Tips from The Best Nonprofit Organizations
      Download Our Playbook